User contributions
From Computational Biophysics and Materials Science Group
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- 23:21, 1 April 2015 (diff | hist) . . (+57) . . How to run a regular NPT simulation
- 23:20, 1 April 2015 (diff | hist) . . (+325) . . How to run a regular NPT simulation
- 11:10, 20 March 2015 (diff | hist) . . (+16) . . How to run a regular NPT simulation
- 11:10, 20 March 2015 (diff | hist) . . (+477) . . How to run a regular NPT simulation
- 16:08, 12 March 2015 (diff | hist) . . (+3,447) . . N Useful VMD-L Mailing List Threads (Created page with "[http://www.ks.uiuc.edu/Research/vmd/mailing_list/vmd-l/24504.html Transparency rendering by Tachyon] Hi, If you want the interior brighter, your easiest options include incr...") (current)
- 15:57, 12 March 2015 (diff | hist) . . (+38) . . Useful
- 10:59, 19 February 2015 (diff | hist) . . (+6) . . Main Page
- 10:59, 19 February 2015 (diff | hist) . . (+2) . . Main Page
- 10:59, 19 February 2015 (diff | hist) . . (+116) . . Main Page
- 13:29, 16 January 2015 (diff | hist) . . (+58) . . Gromacs/Acceleration and parallelization (current)
- 13:29, 16 January 2015 (diff | hist) . . (+28) . . Gromacs/Acceleration and parallelization
- 13:27, 16 January 2015 (diff | hist) . . (+83) . . Gromacs/Acceleration and parallelization
- 13:26, 16 January 2015 (diff | hist) . . (+116) . . Gromacs/Acceleration and parallelization
- 13:25, 16 January 2015 (diff | hist) . . (+263) . . Gromacs/Acceleration and parallelization
- 20:18, 15 January 2015 (diff | hist) . . (+46) . . Gromacs/Acceleration and parallelization
- 20:15, 15 January 2015 (diff | hist) . . (0) . . N File:Compare mpi.png (current)
- 16:43, 14 January 2015 (diff | hist) . . (+796) . . N Gromacs/Acceleration and parallelization (Created page with "Read [http://www.gromacs.org/Documentation/Acceleration_and_parallelization this] first. On Combo, we have compiled several builds of Gromacs. List refers to How to use Com...")
- 16:25, 14 January 2015 (diff | hist) . . (0) . . How To
- 16:22, 14 January 2015 (diff | hist) . . (+83) . . How To
- 16:19, 14 January 2015 (diff | hist) . . (+161) . . How to use Combo
- 14:23, 14 January 2015 (diff | hist) . . (+246) . . How to compile Gromacs
- 14:15, 14 January 2015 (diff | hist) . . (+1,130) . . How to compile Gromacs
- 13:47, 14 January 2015 (diff | hist) . . (+6) . . How to compile Gromacs
- 16:26, 13 January 2015 (diff | hist) . . (+89) . . How to use Combo
- 17:50, 12 January 2015 (diff | hist) . . (+31) . . User:Kevin
- 18:03, 9 January 2015 (diff | hist) . . (+2) . . How to use Combo
- 18:02, 9 January 2015 (diff | hist) . . (+139) . . How to use Combo
- 18:00, 9 January 2015 (diff | hist) . . (+804) . . How to use Combo
- 23:19, 8 January 2015 (diff | hist) . . (+151) . . How to use Combo
- 23:16, 8 January 2015 (diff | hist) . . (+95) . . How to use Combo
- 22:44, 8 January 2015 (diff | hist) . . (+290) . . How to use Combo
- 00:04, 6 January 2015 (diff | hist) . . (-106) . . User:Kevin
- 18:24, 24 December 2014 (diff | hist) . . (+1) . . How to compile Gromacs
- 18:21, 24 December 2014 (diff | hist) . . (+1,577) . . How to compile Gromacs
- 19:14, 20 December 2014 (diff | hist) . . (0) . . My:Group
- 19:13, 20 December 2014 (diff | hist) . . (+10) . . My:Group
- 14:57, 11 December 2014 (diff | hist) . . (+2,004) . . Group Policy (current)
- 01:58, 11 December 2014 (diff | hist) . . (+204) . . Main Page
- 13:32, 10 December 2014 (diff | hist) . . (-49) . . User:Kevin
- 12:58, 10 December 2014 (diff | hist) . . (+241) . . Main Page
- 17:17, 9 December 2014 (diff | hist) . . (+1,036) . . Tricks in VMD (current)
- 13:28, 30 November 2014 (diff | hist) . . (+446) . . Tricks in VMD
- 13:09, 30 November 2014 (diff | hist) . . (+3) . . How to install PyMOL (current)
- 13:08, 30 November 2014 (diff | hist) . . (+255) . . N How to install PyMOL (Created page with "<accesscontrol>My:Group</accesscontrol> To save your (or my) time, I would paste the directly download link of PyMOL here which has been verified after registration at PyMOL ...")
- 13:07, 30 November 2014 (diff | hist) . . (+27) . . How To
- 18:24, 28 November 2014 (diff | hist) . . (+252) . . N Tricks in MATLAB (Created page with "==Quick fitting== http://www.mathworks.com/help/matlab/ref/polyfit.html a= 1:0.1:10; p = polyfit(a,exp(a),5); % Fits a fifth degree polynomial to exp(a) in the Least square...") (current)
- 18:23, 28 November 2014 (diff | hist) . . (+22) . . Useful
- 16:45, 27 November 2014 (diff | hist) . . (+17) . . How To
- 16:40, 27 November 2014 (diff | hist) . . (+4) . . How To
- 11:24, 20 November 2014 (diff | hist) . . (-21) . . Tricks in bash (current)
- 11:24, 20 November 2014 (diff | hist) . . (+7) . . Tricks in bash
- 11:24, 20 November 2014 (diff | hist) . . (+219) . . Tricks in bash
- 11:21, 20 November 2014 (diff | hist) . . (0) . . Tricks in bash
- 16:39, 18 November 2014 (diff | hist) . . (-69) . . How to analysis trajectories with Gromacs (current)
- 16:39, 18 November 2014 (diff | hist) . . (+2,617) . . N How to analysis trajectories with Gromacs (Created page with "==Analyze NAMD and Amber MD trajectories with Gromacs 4.5== Gromacs 4.5 can be linked to VMD libraries so that it can read any trajectory format that VMD can read, so now ther...")
- 16:35, 18 November 2014 (diff | hist) . . (+86) . . How To
- 16:33, 18 November 2014 (diff | hist) . . (+64) . . How to make movies in VMD (current)
- 16:33, 18 November 2014 (diff | hist) . . (+2,925) . . N How to make movies in VMD (Created page with "==by Madison Block and Sam Battey== When setting or changing your working directory or destination folder in the command prompt make sure that if there is a space in your file...")
- 16:26, 18 November 2014 (diff | hist) . . (+32) . . How To
- 16:21, 18 November 2014 (diff | hist) . . (+1,371) . . N Tricks in Linux (Created page with "==Passwordless SSH== Set Up: # Run ssh-keygen -t dsa # Choose a spot to save the file, default location is the best. # Choose a password, or leave blank for no password # Rety...") (current)
- 16:20, 18 November 2014 (diff | hist) . . (-1) . . Useful
- 16:19, 18 November 2014 (diff | hist) . . (+21) . . Useful
- 16:15, 18 November 2014 (diff | hist) . . (+243) . . How To
- 16:13, 18 November 2014 (diff | hist) . . (+105) . . How to make images for publication using VMD
- 16:00, 18 November 2014 (diff | hist) . . (+1,287) . . N How to compile Gromacs (Created page with "==Gromacs MPI Compilation== Download gromacs-4.5.5.tar.gz into /usr/local/src/gromacs See the Installation_Instructions 1. Load Environment Modules: <code> module add intel...")
- 15:57, 18 November 2014 (diff | hist) . . (+29) . . How To
- 15:56, 18 November 2014 (diff | hist) . . (+1,365) . . Tricks in bash
- 15:39, 18 November 2014 (diff | hist) . . (+97) . . How to use Git (current)
- 16:51, 11 November 2014 (diff | hist) . . (-74) . . User:Kevin
- 16:45, 11 November 2014 (diff | hist) . . (+92) . . How to do MDFF (current)
- 03:31, 8 November 2014 (diff | hist) . . (+1,245) . . How to make images for publication using VMD
- 03:31, 8 November 2014 (diff | hist) . . (0) . . N File:System 6mem6dimer surf 2layer aoshiny.bmp (current)
- 18:32, 6 November 2014 (diff | hist) . . (+897) . . How to make images for publication using VMD
- 18:30, 6 November 2014 (diff | hist) . . (0) . . N File:Unsym last vdw now 0604 bg.bmp (current)
- 18:28, 6 November 2014 (diff | hist) . . (0) . . N File:Unsym last vdw now 0804 bg.bmp (current)
- 18:28, 6 November 2014 (diff | hist) . . (0) . . N File:Unsym last vdw now 0803 bg.bmp (current)
- 17:37, 6 November 2014 (diff | hist) . . (+924) . . How to make images for publication using VMD
- 17:32, 6 November 2014 (diff | hist) . . (0) . . N File:Unsym last transmem max1 glass1.bmp (current)
- 17:32, 6 November 2014 (diff | hist) . . (0) . . N File:Unsym last transmem max1 edgyglass.bmp (current)
- 17:32, 6 November 2014 (diff | hist) . . (0) . . N File:Unsym last transmem max1 glassbubble.bmp (current)
- 15:53, 6 November 2014 (diff | hist) . . (+1,495) . . How to make images for publication using VMD
- 15:44, 6 November 2014 (diff | hist) . . (0) . . N File:Barphinwater cg beads 0803.bmp (current)
- 15:42, 6 November 2014 (diff | hist) . . (0) . . N File:Barphinwater cg beads 0804max1 chalky pc.bmp (current)
- 00:59, 6 November 2014 (diff | hist) . . (+2) . . Journal & web links (current)
- 00:58, 6 November 2014 (diff | hist) . . (+43) . . Journal & web links
- 22:10, 5 November 2014 (diff | hist) . . (+1,677) . . How to make images for publication using VMD
- 20:28, 28 October 2014 (diff | hist) . . (+139) . . N File:Inhibitors of Strand Transfer That Prevent Integration and Inhibit HIV-1 Replication in Cells.pdf (Publication mentioned by the Keynote Speaker Prof. McCammon during the Biophysics Symposium at CUHK on 28 Oct 2014 Category:Literatures) (current)
- 19:41, 28 October 2014 (diff | hist) . . (+1) . . m File:Review of Feynman’s Path Integral in Quantum Statistics- from the Molecular Schrodinger Equation to Kleinert’s Variational Perturbation Theory.pdf (current)
- 19:40, 28 October 2014 (diff | hist) . . (+1) . . m File:Review of Feynman’s Path Integral in Quantum Statistics- from the Molecular Schrodinger Equation to Kleinert’s Variational Perturbation Theory.pdf
- 19:40, 28 October 2014 (diff | hist) . . (+10) . . m File:Review of Feynman’s Path Integral in Quantum Statistics- from the Molecular Schrodinger Equation to Kleinert’s Variational Perturbation Theory.pdf
- 19:39, 28 October 2014 (diff | hist) . . (+109) . . N File:Review of Feynman’s Path Integral in Quantum Statistics- from the Molecular Schrodinger Equation to Kleinert’s Variational Perturbation Theory.pdf (Review Article authored by the forth speaker in the Biophysics Symposium at CUHK on 28 Oct 2014 [[Category:]])
- 23:46, 24 October 2014 (diff | hist) . . (+67) . . User:Kevin
- 23:40, 24 October 2014 (diff | hist) . . (-33) . . How to do MDFF
- 23:39, 24 October 2014 (diff | hist) . . (-887) . . How to do MDFF
- 23:36, 24 October 2014 (diff | hist) . . (-82) . . How to do MDFF
- 23:35, 24 October 2014 (diff | hist) . . (+2) . . How to do MDFF
- 23:34, 24 October 2014 (diff | hist) . . (+406) . . How to do MDFF
- 22:25, 24 October 2014 (diff | hist) . . (+82) . . m How to do MDFF
- 19:49, 22 October 2014 (diff | hist) . . (+43) . . How to do MDFF (→Set-up)
- 19:46, 22 October 2014 (diff | hist) . . (+628) . . How to do MDFF (→Set-up)
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