User contributions
From Computational Biophysics and Materials Science Group
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- 18:11, 20 July 2016 (diff | hist) . . (0) . . Progress:Kevin
- 14:30, 20 July 2016 (diff | hist) . . (-9) . . Progress:Kevin (→20160727)
- 14:29, 20 July 2016 (diff | hist) . . (+106) . . Progress:Kevin (→20160727)
- 14:28, 20 July 2016 (diff | hist) . . (+2) . . Progress:Kevin
- 14:28, 20 July 2016 (diff | hist) . . (-202) . . Progress:Kevin
- 14:22, 20 July 2016 (diff | hist) . . (+896) . . Progress:Kevin
- 11:06, 20 July 2016 (diff | hist) . . (-1) . . Progress:Kevin (→20160720)
- 11:05, 20 July 2016 (diff | hist) . . (+282) . . Progress:Kevin
- 11:04, 20 July 2016 (diff | hist) . . (+1) . . Progress:Kevin (→20160706)
- 18:04, 15 July 2016 (diff | hist) . . (+50) . . Progress:Kevin
- 18:03, 15 July 2016 (diff | hist) . . (+104) . . Progress:Kevin
- 17:28, 11 July 2016 (diff | hist) . . (+4) . . Progress:Kevin (→20160706)
- 15:25, 7 July 2016 (diff | hist) . . (+2) . . Progress:Kevin (→20160706)
- 17:46, 6 July 2016 (diff | hist) . . (-16) . . Progress:Kevin
- 17:46, 6 July 2016 (diff | hist) . . (+16) . . Progress:Kevin (→20160706)
- 16:58, 6 July 2016 (diff | hist) . . (+72) . . Progress:Kevin
- 16:22, 6 July 2016 (diff | hist) . . (+26) . . Progress:Kevin (→20160706)
- 14:56, 6 July 2016 (diff | hist) . . (+103) . . Progress:Kevin (→20160706)
- 14:40, 6 July 2016 (diff | hist) . . (+1,034) . . Progress:Kevin
- 14:27, 6 July 2016 (diff | hist) . . (+83) . . N Progress:Kevin (Created page with "This page is used for checklists discussed during the weekly meetings. =20160706= #")
- 14:19, 6 July 2016 (diff | hist) . . (+15) . . Progress (→Members)
- 14:13, 6 July 2016 (diff | hist) . . (+4) . . Progress
- 14:12, 6 July 2016 (diff | hist) . . (+8) . . Progress (→Members)
- 14:12, 6 July 2016 (diff | hist) . . (+30) . . N Progress (Created page with "=Members= Kevin")
- 11:29, 6 July 2016 (diff | hist) . . (0) . . Main Page (→Content)
- 11:29, 6 July 2016 (diff | hist) . . (+14) . . Main Page (→Content)
- 11:17, 6 July 2016 (diff | hist) . . (-7) . . User:Kevin (→Schedule (date-to-date)) (current)
- 12:25, 24 May 2016 (diff | hist) . . (+58) . . OpenMPI and InfiniBand (→Reporting problem) (current)
- 19:18, 17 May 2016 (diff | hist) . . (+7) . . OpenMPI and InfiniBand
- 19:17, 17 May 2016 (diff | hist) . . (+911) . . OpenMPI and InfiniBand
- 15:19, 13 April 2016 (diff | hist) . . (-1) . . How to make images for publication using VMD (→Membrane) (current)
- 15:18, 13 April 2016 (diff | hist) . . (+55) . . How to make images for publication using VMD (→Specific Cases)
- 15:18, 13 April 2016 (diff | hist) . . (0) . . N File:FIG upsmdm-initial-tachyon-5.bmp (current)
- 15:16, 13 April 2016 (diff | hist) . . (+398) . . How to make images for publication using VMD (→Specific Cases)
- 15:42, 30 March 2016 (diff | hist) . . (-49) . . How to compile Gromacs (current)
- 15:39, 30 March 2016 (diff | hist) . . (+601) . . How to compile Gromacs
- 14:06, 3 October 2015 (diff | hist) . . (+568) . . N TCL Write a pdb (Created page with "vm_writepdb.tcl ################################################# ## TCL script to write a pdb of initial structure ## Kevin Apr 2014 ## Usage vmd -dispdev text -e <tcl>...") (current)
- 14:05, 3 October 2015 (diff | hist) . . (+815) . . N TCL Combine trajectories (Created page with "vm_get_index.tcl ############################################################ ## TCL script to get index of single chain protein ## Kevin Apr 2014 ## Usage vmd -dispdev ...") (current)
- 14:04, 3 October 2015 (diff | hist) . . (+72) . . How to do standard MD analysis (current)
- 13:42, 3 October 2015 (diff | hist) . . (+386) . . N How to do standard MD analysis (Created page with "This is just how I do mine and I found it quite cost-effective and most importantly easy to trace. I am more happy to discuss on any better protocols. --~~~~ * Cat trajectory...")
- 13:16, 3 October 2015 (diff | hist) . . (+293) . . How To
- 13:11, 3 October 2015 (diff | hist) . . (+146) . . How To
- 11:11, 17 September 2015 (diff | hist) . . (+36) . . User:Kevin
- 20:57, 16 September 2015 (diff | hist) . . (+1,855) . . How to compile Gromacs
- 17:55, 6 August 2015 (diff | hist) . . (+715) . . How to compile Gromacs
- 13:32, 23 July 2015 (diff | hist) . . (0) . . User:Kevin
- 13:31, 23 July 2015 (diff | hist) . . (-92) . . User:Kevin (→Schedule (date-to-date))
- 14:26, 17 April 2015 (diff | hist) . . (+499) . . How to use Combo (current)
- 12:19, 2 April 2015 (diff | hist) . . (+191) . . How to run a regular NPT simulation (current)
- 23:29, 1 April 2015 (diff | hist) . . (+43) . . How to run a regular NPT simulation
- 23:21, 1 April 2015 (diff | hist) . . (+57) . . How to run a regular NPT simulation
- 23:20, 1 April 2015 (diff | hist) . . (+325) . . How to run a regular NPT simulation
- 11:10, 20 March 2015 (diff | hist) . . (+16) . . How to run a regular NPT simulation
- 11:10, 20 March 2015 (diff | hist) . . (+477) . . How to run a regular NPT simulation
- 16:08, 12 March 2015 (diff | hist) . . (+3,447) . . N Useful VMD-L Mailing List Threads (Created page with "[http://www.ks.uiuc.edu/Research/vmd/mailing_list/vmd-l/24504.html Transparency rendering by Tachyon] Hi, If you want the interior brighter, your easiest options include incr...") (current)
- 15:57, 12 March 2015 (diff | hist) . . (+38) . . Useful
- 10:59, 19 February 2015 (diff | hist) . . (+6) . . Main Page
- 10:59, 19 February 2015 (diff | hist) . . (+2) . . Main Page
- 10:59, 19 February 2015 (diff | hist) . . (+116) . . Main Page
- 13:29, 16 January 2015 (diff | hist) . . (+58) . . Gromacs/Acceleration and parallelization (current)
- 13:29, 16 January 2015 (diff | hist) . . (+28) . . Gromacs/Acceleration and parallelization
- 13:27, 16 January 2015 (diff | hist) . . (+83) . . Gromacs/Acceleration and parallelization
- 13:26, 16 January 2015 (diff | hist) . . (+116) . . Gromacs/Acceleration and parallelization
- 13:25, 16 January 2015 (diff | hist) . . (+263) . . Gromacs/Acceleration and parallelization
- 20:18, 15 January 2015 (diff | hist) . . (+46) . . Gromacs/Acceleration and parallelization
- 20:15, 15 January 2015 (diff | hist) . . (0) . . N File:Compare mpi.png (current)
- 16:43, 14 January 2015 (diff | hist) . . (+796) . . N Gromacs/Acceleration and parallelization (Created page with "Read [http://www.gromacs.org/Documentation/Acceleration_and_parallelization this] first. On Combo, we have compiled several builds of Gromacs. List refers to How to use Com...")
- 16:25, 14 January 2015 (diff | hist) . . (0) . . How To
- 16:22, 14 January 2015 (diff | hist) . . (+83) . . How To
- 16:19, 14 January 2015 (diff | hist) . . (+161) . . How to use Combo
- 14:23, 14 January 2015 (diff | hist) . . (+246) . . How to compile Gromacs
- 14:15, 14 January 2015 (diff | hist) . . (+1,130) . . How to compile Gromacs
- 13:47, 14 January 2015 (diff | hist) . . (+6) . . How to compile Gromacs
- 16:26, 13 January 2015 (diff | hist) . . (+89) . . How to use Combo
- 17:50, 12 January 2015 (diff | hist) . . (+31) . . User:Kevin
- 18:03, 9 January 2015 (diff | hist) . . (+2) . . How to use Combo
- 18:02, 9 January 2015 (diff | hist) . . (+139) . . How to use Combo
- 18:00, 9 January 2015 (diff | hist) . . (+804) . . How to use Combo
- 23:19, 8 January 2015 (diff | hist) . . (+151) . . How to use Combo
- 23:16, 8 January 2015 (diff | hist) . . (+95) . . How to use Combo
- 22:44, 8 January 2015 (diff | hist) . . (+290) . . How to use Combo
- 00:04, 6 January 2015 (diff | hist) . . (-106) . . User:Kevin
- 18:24, 24 December 2014 (diff | hist) . . (+1) . . How to compile Gromacs
- 18:21, 24 December 2014 (diff | hist) . . (+1,577) . . How to compile Gromacs
- 19:14, 20 December 2014 (diff | hist) . . (0) . . My:Group
- 19:13, 20 December 2014 (diff | hist) . . (+10) . . My:Group
- 14:57, 11 December 2014 (diff | hist) . . (+2,004) . . Group Policy (current)
- 01:58, 11 December 2014 (diff | hist) . . (+204) . . Main Page
- 13:32, 10 December 2014 (diff | hist) . . (-49) . . User:Kevin
- 12:58, 10 December 2014 (diff | hist) . . (+241) . . Main Page
- 17:17, 9 December 2014 (diff | hist) . . (+1,036) . . Tricks in VMD (current)
- 13:28, 30 November 2014 (diff | hist) . . (+446) . . Tricks in VMD
- 13:09, 30 November 2014 (diff | hist) . . (+3) . . How to install PyMOL (current)
- 13:08, 30 November 2014 (diff | hist) . . (+255) . . N How to install PyMOL (Created page with "<accesscontrol>My:Group</accesscontrol> To save your (or my) time, I would paste the directly download link of PyMOL here which has been verified after registration at PyMOL ...")
- 13:07, 30 November 2014 (diff | hist) . . (+27) . . How To
- 18:24, 28 November 2014 (diff | hist) . . (+252) . . N Tricks in MATLAB (Created page with "==Quick fitting== http://www.mathworks.com/help/matlab/ref/polyfit.html a= 1:0.1:10; p = polyfit(a,exp(a),5); % Fits a fifth degree polynomial to exp(a) in the Least square...") (current)
- 18:23, 28 November 2014 (diff | hist) . . (+22) . . Useful
- 16:45, 27 November 2014 (diff | hist) . . (+17) . . How To
- 16:40, 27 November 2014 (diff | hist) . . (+4) . . How To
- 11:24, 20 November 2014 (diff | hist) . . (-21) . . Tricks in bash (current)
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